This model implements the equations proposed by Ketchum in 1954. The rationale behind the concept is that only phytoplankton that grows above a certain rate will not be flushed out of an estuary.  For biological processes:  Pt  =  Po exp(kt)  Where Pt is the phytoplankton biomass at time t, Po is th
This model implements the equations proposed by Ketchum in 1954. The rationale behind the concept is that only phytoplankton that grows above a certain rate will not be flushed out of an estuary.

For biological processes:

Pt  =  Po exp(kt)

Where Pt is the phytoplankton biomass at time t, Po is the initial biomass, and k is the growth rate.

For physical processes:

Pm  =  Po (1-r)^m

Where Pm is the phytoplankton biomass after m tidal cycles, and r is the exchange ratio (proportion of estuary water which does not return each tidal cycle).

By substitution, and replacing t by m in the first equation, we get:

Pm = Poexp(km).(1-r)^m

For phytoplankton to exist in an estuary, Pm = Po (at least), i.e. 1 / (1-r)^m = exp(km)
ln(1) - m.ln(1-r) = km
-m.ln(1-r) = km
k = -ln(1-r)

Ketchum (1954) Relation between circulation and planktonic populations in estuaries. Ecology 35: 191-200.

In 2005, Ferreira and co-workers showed that this balance has direct implications on biodiversity of estuarine phytoplankton, and discussed how this could be relevant for water management, in particular for the EU Water Framework Directive 60/2000/EC (Ecological Modelling, 187(4) 513-523).
Logistic growth of an antelope population to a carrying capacity.
Logistic growth of an antelope population to a carrying capacity.
In Chile,  60% of its population are exposed to levels of Particulate Matter (PM) above international standards . Air Pollution is causing  4,000 premature deaths per year , including health costs over US$8 billion.    The System Dynamics Causal Loop Diagram developed herein shows an initial study o
In Chile, 60% of its population are exposed to levels of Particulate Matter (PM) above international standards. Air Pollution is causing 4,000 premature deaths per year, including health costs over US$8 billion.

The System Dynamics Causal Loop Diagram developed herein shows an initial study of the dynamics among the variables that influences the accumulation of PM in the air, in particular the case of Temuco, in the South of Chile. In Temuco, 97% of the PM inventories comes from the combustion of low quality firewood, which in turns is being burned due to its low price and cultural habits/tradition.
 This model describes phosphorus cycling in a dune-lake system in the Northland region of New Zealand. It is based on stock and flow diagrams where each orange oval represents an input, while each blue box represents a stock. Each arrow represents a flow. Flows involve a loss from the stock at which

This model describes phosphorus cycling in a dune-lake system in the Northland region of New Zealand. It is based on stock and flow diagrams where each orange oval represents an input, while each blue box represents a stock. Each arrow represents a flow. Flows involve a loss from the stock at which they start and add to the stock at which they end.

First level of slowly building up a generic cost-benefit model primarily to show T313 students but useful elsewhere
First level of slowly building up a generic cost-benefit model primarily to show T313 students but useful elsewhere
Just recently, there was a huge problem that ended about C8, a deadly chemical, that was poured into lakes and rivers by DuPont, a company that sold nylon. This chemical caused a huge consensus, many birth defects, and cows with green insides spraying blood from many places.
Just recently, there was a huge problem that ended about C8, a deadly chemical, that was poured into lakes and rivers by DuPont, a company that sold nylon. This chemical caused a huge consensus, many birth defects, and cows with green insides spraying blood from many places.
European Masters in System Dynamics 2016 New University of Lisbon, Portugal  Simple model to represent oyster individual growth by simulating feeding and metabolism.
European Masters in System Dynamics 2016
New University of Lisbon, Portugal

Simple model to represent oyster individual growth by simulating feeding and metabolism.
This model explains the primary production of phytoplankton, forced by light and nutrients over a year period.
This model explains the primary production of phytoplankton, forced by light and nutrients over a year period.


Modeling forest succession in a northeast deciduous forest.
Modeling forest succession in a northeast deciduous forest.
Primitives for Watershed modeling project. Click Clone Insight at the top right to make a copy that you can edit.  The converter in this file contains precipitation for Phoenix only.
Primitives for Watershed modeling project. Click Clone Insight at the top right to make a copy that you can edit.

The converter in this file contains precipitation for Phoenix only.
Simple mass balance model for lakes, based on the Vollenweider equation:  dMw/dt = Min - sMw - Mout  The model was first used in the 1960s to determine the phosphorus concentration in lakes and reservoirs, for eutrophication assessment.
Simple mass balance model for lakes, based on the Vollenweider equation:

dMw/dt = Min - sMw - Mout

The model was first used in the 1960s to determine the phosphorus concentration in lakes and reservoirs, for eutrophication assessment.
This model implements the one-dimensional version of the advection-dispersion equation for an estuary. The equation is:  dS/dt = (1/A)d(QS)/dx - (1/A)d(EA)/dx(dS/dx) (Eq. 1)  Where S: salinity (or any other constituent such as chlorophyll or dissolved oxygen), (e.g. kg m-3); t: time (s); A: cross-se
This model implements the one-dimensional version of the advection-dispersion equation for an estuary. The equation is:

dS/dt = (1/A)d(QS)/dx - (1/A)d(EA)/dx(dS/dx) (Eq. 1)

Where S: salinity (or any other constituent such as chlorophyll or dissolved oxygen), (e.g. kg m-3); t: time (s); A: cross-sectional area (m2); Q: river flow (m3 s-1); x: length of box (m); E: dispersion coefficient (m2 s-1).

For a given length delta x, Adx = V, the box volume. For a set value of Q, the equation becomes:

VdS/dt = QdS - (d(EA)/dx) dS (Eq. 2)

EA/x, i.e. (m2 X m2) / (m s) = E(b), the bulk dispersion coefficient, units in m3 s-1, i.e. a flow, equivalent to Q

At steady state, dS/dt = 0, therefore we can rewrite Eq. 2 for one estuarine box as:

Q(Sr-Se)=E(b)r,e(Sr-Se)-E(b)e,s(Se-Ss) (Eq. 3)

Where Sr: river salinity (=0), Se: mean estuary salinity; Ss: mean ocean salinity

E(b)r,e: dispersion coefficient between river and estuary, and E(b)e,s: dispersion coefficient between the estuary and ocean.

By definition the value of E(b)r,e is zero, otherwise we are not at the head (upstream limit of salt intrusion) of the estuary. Likewise Sr is zero, otherwise we're not in the river. Therefore:

QSe=E(b)e,s(Se-Ss) (Eq. 4)

At steady state

E(b)e,s = QSe/(Se-Ss) (Eq 5)

The longitudinal dispersion simulates the turbulent mixiing of water in the estuary during flood and ebb, which supplies salt water to the estuary on the flood tide, and make the sea a little more brackish on the ebb.

You can use the slider to turn off dispersion (set to zero), and see that if the tidal wave did not mix with the estuary water due to turbulence, the estuary would quickly become a freshwater system.
Simple (Kind of) food web of the Cane Toad Species. Includes different levels of consumers including predators.
Simple (Kind of) food web of the Cane Toad Species. Includes different levels of consumers including predators.
This model shows the growth of two organisms competing for a limiting resource (space) .
This model shows the growth of two organisms competing for a limiting resource (space) .
Very simple model demonstrating growth of phytoplankton using Steele's equation for potential production and Michaelis-Menten equation for nutrient limitation.  Both light and nutrients (e.g. nitrogen) are modelled as forcing functions, and the model is "over-calibrated" for stability.  The phytopla
Very simple model demonstrating growth of phytoplankton using Steele's equation for potential production and Michaelis-Menten equation for nutrient limitation.

Both light and nutrients (e.g. nitrogen) are modelled as forcing functions, and the model is "over-calibrated" for stability.

The phytoplankton model approximately reproduces the spring-summer diatom bloom and the (smaller) late summer dinoflagellate bloom.
 
Oyster growth is modelled only as a throughput from algae. Further developments would include filtration as a function of oyster biomass, oyster mortality, and other adjustments.
This model illustrates predator prey interactions using real-life data of fox and rabbit populations.
This model illustrates predator prey interactions using real-life data of fox and rabbit populations.
M.Sc. in Environmental Engineering SIMA 2018 New University of Lisbon, Portugal   Model to represent oyster individual growth by simulating feeding and metabolism. Model (i) partitions metabolic costs into feeding and fasting catabolism; (ii) adds allometry to clearance rate; (iii) adds temperature
M.Sc. in Environmental Engineering SIMA 2018
New University of Lisbon, Portugal

 Model to represent oyster individual growth by simulating feeding and metabolism. Model (i) partitions metabolic costs into feeding and fasting catabolism; (ii) adds allometry to clearance rate; (iii) adds temperature dependence to clearance rate; (iv) illustrates how clearance rate per gram is used if we multiply by the oyster biomass